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Machine learning could predict medication response in patients with complex mood disorders
Mood disorders like major depressive disorder (MDD) and bipolar disorder are often complex and hard to diagnose, especially among youth when the illness is just evolving. This can make decisions about medication difficult. In a collaborative study by Lawson Health Research Institute, The Mind Research Network and Brainnetome Center, researchers have developed an artificial intelligence (AI) algorithm that analyzes brain scans to better classify illness in patients with a complex mood disorder and help predict their response to medication.
The full study included 78 emerging adult patients from mental health programs at London Health Sciences Centre (LHSC), primarily from the First Episode Mood and Anxiety Program (FEMAP). The first part of the study involved 66 patients who had already completed treatment for a clear diagnosis of either MDD or bipolar type I (bipolar I), which is a form of bipolar disorder that features full manic episodes, as well as an additional 33 research participants with no history of mental illness. Each individual participated in scanning to examine different brain networks using Lawson’s functional magnetic resonance imaging (fMRI) capabilities at St. Joseph’s Health Care London.
The research team analyzed and compared the scans of those with MDD, bipolar I and no history of mental illness, and found the three groups differed in particular brain networks. These included regions in the default mode network, a set of regions thought to be important for self-reflection, as well as in the thalamus, a ‘gateway’ that connects multiple cortical regions and helps control arousal and alertness.
The data was used by researchers at The Mind Research Network to develop an AI algorithm that uses machine learning to examine fMRI scans to classify whether a patient has MDD or bipolar I. When tested against the research participants with a known diagnosis, the algorithm correctly classified their illness with 92.4 per cent accuracy.
The research team then performed imaging with 12 additional participants with complex mood disorders for whom a diagnosis was not clear. They used the algorithm to study a participant’s brain function to predict his or her diagnosis and, more importantly, examined the participant’s response to medication.
“Antidepressants are the gold standard pharmaceutical therapy for MDD while mood stabilizers are the gold standard for bipolar I,” says Dr. Elizabeth Osuch, a clinician-scientist at Lawson, medical director at FEMAP and co-lead investigator on the study. “But it becomes difficult to predict which medication will work in patients with complex mood disorders when a diagnosis is not clear. Will they respond better to an antidepressant or to a mood stabilizer?”
The research team hypothesized that participants classified by the algorithm as having MDD would respond to antidepressants while those classified as having bipolar I would respond to mood stabilizers. When tested with the complex patients, 11 out of 12 responded to the medication predicted by the algorithm.
“Machine learning is an approach that learns in a data-centric way, providing information that can be used to predict future data sets. In this case, that’s the prediction of MDD from bipolar I,” says Dr. Vince Calhoun, President of The Mind Research Network; Distinguished Professor, Departments of Electrical and Computer Engineering, Neurosciences, Computer Science, and Psychiatry at The University of New Mexico; and co-lead investigator on the study. “There are multiple layers of algorithms in this project. The first layer includes an approach that automatically extracts brain networks from the data provided and the second layer includes automatically identifying which combinations of networks are most sensitive or predictive of MDD and bipolar I.”
Above: Dr. Vince Calhoun
“This study takes a major step towards finding a biomarker of medication response in emerging adults with complex mood disorders,” says Dr. Osuch. “It also suggests that we may one day have an objective measure of psychiatric illness through brain imaging that would make diagnosis faster, more effective and more consistent across health care providers.”
Psychiatrists currently make a diagnosis based on the history and behavior of a patient. Medication decisions are based on that diagnosis. “This can be difficult with complex mood disorders and in the early course of an illness when symptoms may be less well-defined,” says Dr. Osuch. “Patients may also have more than one diagnosis, such as a combination of a mood disorder and a substance abuse disorder, further complicating diagnosis. Having a biological test or procedure to identify what class of medication a patient will respond to would significantly advance the field of psychiatry.”
The study, “Complexity in mood disorder diagnosis: fMRI connectivity networks predicted medication-class of response in complex patients,” is published online in Acta Psychiatrica Scandinavica. Local support included donor funding through London Health Sciences Foundation.
Learn more about this research:
Above: Drs. Elizabeth Osuch and Jean Théberge, Lawson scientists
Maternal diabetes impacts oxygen flow in umbilical cord, study suggests
A new Lawson Health Research Institute study published in the journal Placenta has found a unexpected difference in the impact of pre-existing diabetes versus gestational diabetes on oxygen flow in the umbilical cord during pregnancy.
Currently, tests done very close to the end of a high-risk pregnancy can’t reliably measure the full health of the placenta and baby. Women with complications like diabetes, high blood pressure and an elevated BMI (body mass index), among others, are therefore generally advised to induce labour before the 40-week mark.
“This study explored some of these high-risk pregnancies to better understand what occurs or changes in the placenta with the goal of eventually developing better tests,” says Dr. Barbra de Vrijer, High-Risk Obstetrician and Head of Maternal Fetal Medicine at London Health Sciences Centre and Scientist at Lawson.
The St. Joseph’s Health Care London Perinatal Database, containing information on nearly 70,000 births between 1990 and 2011, provided the data for the study, including birth weight, placental weight and umbilical cord oxygen levels.
The study found that the number of blood vessels in the placenta (called vascularity) likely impacts oxygen in the umbilical vein, causing a slight increase in mothers with gestational diabetes, but a decrease in those with pre-existing diabetes.
Surprisingly, this new research indicates that hyper-vascularity in diabetic placentas (too many blood vessels) may actually decrease oxygen transfer, potentially leading to more risk to the baby.
“When there is an increase in placental vascularity, crowding of the blood vessels can occur constraining their effective absorbing surface area for oxygen uptake from maternal blood within the placenta,” says Dr. Bryan Richardson, Scientist at Lawson.
Another finding of the study confirmed earlier research showing that in women with both pre-existing and gestational diabetes, who tend to have larger babies, the placentas were also disproportionately larger, which is an indicator of decreasing placental efficiency, or the birth to placental weight ratio.
While additional research is needed, Dr. de Vrijer sees hope in the development of newer tests that look at factors like metabolic markers – the results of which could help indicate if the placenta is insufficient and assist in decisions like whether and when to induce labour.
“There are new technologies that we are looking at studying moving forward,” says Dr. de Vrijer. “Our team is focused on continuing our research to better understand high-risk pregnancies with a goal of continuously improving care for pregnant individuals.”
Lawson Health Research Institute is one of Canada’s top hospital-based research institutes, tackling the most pressing challenges in health care. As the research institute of London Health Sciences Centre and St. Joseph’s Health Care London, our innovation happens where care is delivered. Lawson research teams are at the leading-edge of science with the goal of improving health and the delivery of care for patients. Working in partnership with Western University, our researchers are encouraged to pursue their curiosity, collaborate often and share their discoveries widely. Research conducted through Lawson makes a difference in the lives of patients, families and communities around the world. To learn more, visit www.lawsonresearch.ca.
Communications Consultant & External Relations
Lawson Health Research Institute
T: 519-685-8500 ext. ext. 64059
C: 226-919-4748
@email
Maternal diabetes impacts oxygen flow in umbilical cord, study suggests
A new Lawson Health Research Institute study published in the journal Placenta has found a unexpected difference in the impact of pre-existing diabetes versus gestational diabetes on oxygen flow in the umbilical cord during pregnancy.
Currently, tests done very close to the end of a high-risk pregnancy can’t reliably measure the full health of the placenta and baby. Women with complications like diabetes, high blood pressure and an elevated BMI (body mass index), among others, are therefore generally advised to induce labour before the 40-week mark.
“This study explored some of these high-risk pregnancies to better understand what occurs or changes in the placenta with the goal of eventually developing better tests,” says Dr. Barbra de Vrijer, High-Risk Obstetrician and Head of Maternal Fetal Medicine at London Health Sciences Centre and Scientist at Lawson.
The St. Joseph’s Health Care London Perinatal Database, containing information on nearly 70,000 births between 1990 and 2011, provided the data for the study, including birth weight, placental weight and umbilical cord oxygen levels.
The study found that the number of blood vessels in the placenta (called vascularity) likely impacts oxygen in the umbilical vein, causing a slight increase in mothers with gestational diabetes, but a decrease in those with pre-existing diabetes.
Surprisingly, this new research indicates that hyper-vascularity in diabetic placentas (too many blood vessels) may actually decrease oxygen transfer, potentially leading to more risk to the baby.
“When there is an increase in placental vascularity, crowding of the blood vessels can occur constraining their effective absorbing surface area for oxygen uptake from maternal blood within the placenta,” says Dr. Bryan Richardson, Scientist at Lawson.
Another finding of the study confirmed earlier research showing that in women with both pre-existing and gestational diabetes, who tend to have larger babies, the placentas were also disproportionately larger, which is an indicator of decreasing placental efficiency, or the birth to placental weight ratio.
While additional research is needed, Dr. de Vrijer sees hope in the development of newer tests that look at factors like metabolic markers – the results of which could help indicate if the placenta is insufficient and assist in decisions like whether and when to induce labour.
“There are new technologies that we are looking at studying moving forward,” says Dr. de Vrijer. “Our team is focused on continuing our research to better understand high-risk pregnancies with a goal of continuously improving care for pregnant individuals.”
Meet the Team
The HULC Clinical Research Laboratory includes a multidisciplinary team of surgeons, therapists, engineers, scientists, technicians and graduate students working alongside research participants to improve patient care.
Meet the Research Team
Researchers
Joy C. MacDermid
Location: St. Joseph’s Health Care London
Role: Co-director
Phone: 519-661-2111 EXT: 64636
Degree and Qualifications: BSc, BScPT, MSc, PhD
Email: @email
Academic publication:
Google Scholar Homepage: https://scholar.google.ca/citations?user=O8LegU4AAAAJ&hl=en
PubMed: http://www.ncbi.nlm.nih.gov/pubmed?cmd=PureSearch&term=macdermid+j%5bAu…
My research aims to reduce the burden of musculoskeletal (MSK) pain, injury and chronic disease in studies that:
- Develop and test useful and valid measures of MSK symptoms and work role function.
- Identify modifiable biologic, psychosocial and environmental risk factors; and test how these are mediated by sex/gender.
- Test workplace, surgical and rehabilitation interventions that optimize ability and function.
- Assess musculoskeletal health at a population level
- Conduct knowledge translation research that guides efficient and effective implementation.
I conduct my work in collaboration with HULC researchers and clinicians, trainees and committed research teams that conduct national clinical trials, and research institutes comprised of high-quality researchers including IC/ES, The Bone and Joint Institute, and CIPSRT.
Staff
Katrina Munro
Name: Katrina Munro
Location: St. Joseph’s Health Care London
Role: Clinical Research Coordinator
Phone: 519-646-6100 EXT: 64544
Email: @email
Ze Lu (Steve)
Name: Ze Lu (Steve)
Location: St. Joseph’s Health Care London
Role: Clinical research assistant
Phone: 519-646-6100 EXT: 64544
Email: @email
Bansari Patel
Name: Bansari Patel
Location: St. Joseph’s Health Care London
Role: Clinical research assistant
Phone: 519-646-6100 EXT: 64544
Email: @email
Sahar Johari
Name: Sahar Johari
Location: St. Joseph’s Health Care London
Role: Clinical research assistant
Phone: 519-646-6100 EXT: 64544
Email: @email
Students
The HULC Clinical Research Laboratory provides education and training to the next generation of clinical researchers. Under the direction of Dr. Joy MacDermid, the lab produces high-quality research on measuring, predicting and reducing upper extremity disability with a focus on surgery and rehabilitation. Students and trainees play an important role on our team. They include post-doctoral fellows, Ph.D. and Master’s candidates, co-op students, clinical fellows, residents, medical students, and physiotherapy students.
Trainees
The HULC Clinical Research Laboratory provides education and training to the next generation of clinical researchers. Under the direction of Dr. Joy MacDermid, the lab produces high-quality research on measuring, predicting and reducing upper extremity disability with a focus on surgery and rehabilitation. Students and trainees play an important role on our team. They include post-doctoral fellows, Ph.D. and Master’s candidates, co-op students, clinical fellows, residents, medical students, and physiotherapy students.
Current Trainees
Daniel Briatico
Past Trainees
Aksha Mehta
Bansari Patel
Hajra Batool
Mahdiyeh Shafiezadeh Bafghi
Safa Jamaluddin
Opportunities
All of the HULC labs provide excellent training opportunities. See each of our lab websites for details.
There are about 20-25 trainees in the Clinical Research Lab. The lab has opportunities available for post-doctoral fellows, PhD and master’s candidates, co-op students, clinical fellows, residents, medical students and physiotherapy students.
Students can pursue a master’s or Ph.D. with Dr. MacDermid by enrolling in the Faculty of Health Sciences. Dr. MacDermid supervises students in multiple fields including Physical Therapy, Measurement and Methods, and Health Promotion. For more details on these programs and the admission requirements and process consult with the website and program staff. Funding is available for students who meet program requirements.
https://www.uwo.ca/fhs/programs/hrs/programs.html
Post-docs are individually arranged and dependent on funding.
Medical trainees can take research training by enrolling in the Masters in Surgery:
https://www.schulich.uwo.ca/surgery/education/msc_in_surgery/index.html
Training and Permissions
As a hospital-based clinical research lab, HULC adheres to the policies of St. Joseph’s Health Care London and Lawson Health Research Institute. Students and trainees are required to complete the appropriate training and permissions through Medical Affairs at St. Joseph’s.
Learn more about orientation information at St. Joseph’s, including required learning.
If you have any questions related to training or permissions in your role at HULC, please speak to your supervisor.
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